genewise output
Score 130.36 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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gi|299471650|em  107 LPFDNRVIRELPVDPITDNYVRRVENACFS                    
                     L +DN   + LPV+        RV+NA F+                    
                     LQWDNISTKYLPVEEEGPKGPHRVQNAIFA                    
gi|284818157|gb -601 cctgaataatccgggggcagcccgcagatg                    
                     tagaatccaatctaaagcagcagtaacttc                    
                     gagccaagattaagaaacggatcagtctcc                    


gi|299471650|em  137                           VAPDPVVKPVMVAASNSALGLLG 
                                               V P P+    +VAAS SAL ++G 
                                I:R[aga]       VNPTPLRDVKLVAASKSALEIVG 
gi|284818157|gb -511 AGGTAAGAT  Intron 1   CAGAgacactcggacgggtatgtgagg 
                       <2-----[509  :  469]-2> taccctgatattcccacctattg 
                                               ctatagatcgcctagagaaaatg 


gi|299471650|em  161 LA                          EEGQREDAAEYFSGNKLMPGA 
                     L                           +  +  D A  FSGN+L+PG+ 
                     LK          A:E[gaa]        DIPE-DDLAAVFSGNQLLPGS 
gi|284818157|gb -398 taGGTGAGGG  Intron 2   CAGAAgacg ggcgggttgaccccgt 
                     ta <1-----[391  :  358]-1>  atca aatccttcgaattcgc 
                     ag                          ttcg tctgatcggtgaggat 


gi|299471650|em  185 QPHAHAYCGHQF                          SFAGQLGDGAA 
                     +P AH YCGHQF                           FAGQLGDGAA 
                     KPFAHCYCGHQF          G:G[gga]        VFAGQLGDGAA 
gi|284818157|gb -295 actgctttgcctGGTGGGTT  Intron 3   AAGGAgtggctggggg 
                     actcagaggaat <1-----[258  :  228]-1>  ttcgatgagcc 
                     gtcttccctcgt                          tcttagacgtg 


gi|299471650|em  209 MYLGEVEGPSGR--WEIQFKGAGLTPYSRSADGRKVLRSSIRE       
                     +YLGEV G +G   W +Q+KG+GLTP+SR ADGRKVLRSS+RE       
                     IYLGEVRGAAGAETWALQLKGSGLTPFSRDADGRKVLRSSLRE       
gi|284818157|gb -192 atcgggcggggggatgtccagagcactaaggggaagccttcag       
                     tatgatggccgcacgctatagggtcctggacaggattgcctga       
                     tttaaggggaaggcggaagaatcgaatcacgccggtttcccaa       


//
Making a R in phase 2 intron
Making a E in phase 1 intron
Making a G in phase 1 intron
>gi|284818157|gb|ABJQ01001750.1|.pep
LQWDNISTKYLPVEEEGPKGPHRVQNAIFARVNPTPLRDVKLVAASKSALEIVGLKEDIP
EDDLAAVFSGNQLLPGSKPFAHCYCGHQFGVFAGQLGDGAAIYLGEVRGAAGAETWALQL
KGSGLTPFSRDADGRKVLRSSLRE
//
>gi|284818157|gb|ABJQ01001750.1|.[601:62].sp
CTGCAATGGGACAACATATCAACGAAATATCTTCCAGTAGAGGAAGAAGGACCCAAGGGG
CCACATCGCGTACAGAATGCCATTTTCGCCAGAGTCAATCCAACTCCATTGCGAGATGTC
AAGCTCGTCGCTGCATCGAAATCGGCATTAGAAATAGTTGGGTTAAAGGAAGATATTCCC
GAGGATGACCTTGCGGCAGTTTTCTCGGGGAATCAGCTACTGCCGGGATCTAAGCCTTTC
GCTCATTGCTACTGCGGTCACCAGTTTGGAGTTTTCGCTGGTCAATTGGGAGACGGGGCT
GCGATTTATCTTGGAGAAGTGCGGGGGGCGGCAGGAGCGGAGACCTGGGCGTTACAACTG
AAAGGAAGTGGCCTGACACCATTTAGCAGAGACGCGGACGGCAGGAAGGTTCTTCGTTCC
TCCCTCAGAGAA
//
gi|284818157|gb|ABJQ01001750.1|	GeneWise	match	601	64	131.36	-	.	gi|284818157|gb|ABJQ01001750.1|-genewise-prediction-1
gi|284818157|gb|ABJQ01001750.1|	GeneWise	cds	601	510	0.00	-	0	gi|284818157|gb|ABJQ01001750.1|-genewise-prediction-1
gi|284818157|gb|ABJQ01001750.1|	GeneWise	intron	509	469	0.00	-	.	gi|284818157|gb|ABJQ01001750.1|-genewise-prediction-1
gi|284818157|gb|ABJQ01001750.1|	GeneWise	cds	468	392	0.00	-	1	gi|284818157|gb|ABJQ01001750.1|-genewise-prediction-1
gi|284818157|gb|ABJQ01001750.1|	GeneWise	intron	391	358	0.00	-	.	gi|284818157|gb|ABJQ01001750.1|-genewise-prediction-1
gi|284818157|gb|ABJQ01001750.1|	GeneWise	cds	357	259	0.00	-	2	gi|284818157|gb|ABJQ01001750.1|-genewise-prediction-1
gi|284818157|gb|ABJQ01001750.1|	GeneWise	intron	258	228	0.00	-	.	gi|284818157|gb|ABJQ01001750.1|-genewise-prediction-1
gi|284818157|gb|ABJQ01001750.1|	GeneWise	cds	227	64	0.00	-	2	gi|284818157|gb|ABJQ01001750.1|-genewise-prediction-1
//